BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029D12LP1|AL429063
(202 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig168 316 9e-87
>3x_Contig168
Length = 941
Score = 316 bits (159), Expect = 9e-87
Identities = 159/159 (100%)
Strand = Plus / Minus
Query: 1 atctttaaataaaacttatatttgagattatttaaatgaattaagtaataaaggtgtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atctttaaataaaacttatatttgagattatttaaatgaattaagtaataaaggtgtaaa 100
Query: 61 attacaacatttaaataatattaattcttgatcatctcaaatttataaatttaataaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 attacaacatttaaataatattaattcttgatcatctcaaatttataaatttaataaaac 40
Query: 121 tgaagaaattaataatactatttatgatagattagtaac 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 tgaagaaattaataatactatttatgatagattagtaac 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2814
Number of Sequences: 1807
Number of extensions: 2814
Number of successful extensions: 95
Number of sequences better than 1.0e-20: 1
length of query: 202
length of database: 10,358,551
effective HSP length: 16
effective length of query: 186
effective length of database: 10,329,639
effective search space: 1921312854
effective search space used: 1921312854
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 49 (97.9 bits)